By the time its released I would imagine the last of the line of the PPC macs will be supported, and from what I can gather there will be very little difference between them and the X1000, excepet of course about £2k in price 
As I've mentioned before, the fastest PPC Mac (G5) used DDR2-533 memory.
The X1000 should outperform it. The SAM460 already outperforms a G4 1.5Ghz on large memory intensive tasks.
They both support modern graphics cards that will never see the light of day on Mac hardware so they will have a gaming edge for 3D.
The classic Amigas were faster in there day than PCs because the cpu had fast custom chips supporting it. SAM460 and X1000 have faster "custom" chips (and bus) than the Macs...and by "custom", I mean every chip that is not the cpu.
There is also something to be said for *new* vs. *used*.
Personally, I don't see why MOS isn't ported to SAM440/460. People in particular currently owning 440's may be selling them in order to upgrade to the 460... People already in possession of a SAM would be making a conscious decision to support MOS so I don't see why the powers that be simply don't do it. Gotta love politics...