Because its a simulation and simulations are not real. You can make up 1000 different simulations of something and get 1000 different answers.
If they actually knew the answer for a fact then it would be called a Calculation, not a simulation. Right?
There is always a margin of error for maximum clock speed, even with real chips. An 8mhz 68000 doesn't include anything that limits it to exactly that speed for instance. They just picked a round number out of the air and designed it so that the power and heat were roughly within other numbers that they picked out of the air.
However if you're talking about how fast a CPU in an FPGA will run at a given clock speed, then the simulation should easily be able to come up with an accurate answer for that.