It might be useful to have a 68020 + 68841-MMU. When your at it anyway..

A single 68030 does the same job too.
Do you have any idea on the peak di/dt of the FPGA?, it has relevance on the latancy response of the buck converter especially for the 1,2V rail.
I see you use 2,5V with linear regulator for the VTT to DDR memory. I been pondering if one can drive this with an buck converter aswell, or if the noise problems would be too great.
Guess the Minimigs get an incentive to go dynamic ram now that the fpgaarcade-replay board has 32 MB, and the Minimig has 2 MB

(your board name is FpgaArcade-Replay v0.0 ?)