Pin 1 is +5, Pin 4 is +12, with 2/3 as ground. Most PS have separate grounds. Reading across two + leads was interesting, but not beneficial.
As the IDC50 SCSI connector has 7 electrical grounds (aside from 18 electronic grounds), your "guy" might have used the ground within the ribbon cable as electrical ground. (The standard 2.5 drives use power thru the cable, right?).
Adding a ground will not hurt, but I surmise your real problem is in the cabling. Attaching an extension, while reducing from 3.5" to 2.5" cabling has got to produce stress. Especially after years of wear, jiggling about, vacuuming, etc.