Hi!
Skipping the ram-handler module is one possible solution, but not very elegant...:-), especially when other people want to try your library WITH the ram-handler.
Did you know that there are some semi-official patches for OS3.9-BB2? A lot of people do not know them, because they are not officially released by Amiga Inc. or Haage & Partner, BUT they are from the guy who actually wrote those library for OS3.9 (his name is Thomas Richter/THOR). There were at least two patches for OS3.9 stuff (after! BB2) released from him to aminet:
util/boot/patchram
util/boot/shellupdate
Maybe the new version of the ram-handler can cure your problem.
Regards,
Frank