Your best bet for running classic Amiga software (version 3.x) is to buy the
Amiga Forever emulator package. It has a live boot based on Linux that automatically runs AmigaOS under EUAE. You should be able to run it on your Linux box from there. If you want to have a real classic Amiga system, watch Ebay for an Amiga 1200 system. It uses totally custom architecture so you can't just build one yourself.
As for NEW Amiga hardware, you'll have to wait until the SAM440EP comes out or get a MorphOS system running on the Efika motherboard from Genesi. (MorphOS is a spin-off of AmigaOS that uses many of the same features.)
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If you want multiuser support, you'll have to use the requestchoice command from the AmigaDOS shell and place your custom user-startup settings in the s:startup-sequence file.
If you want more AROS information, check out the forums on
AROS-Exec.org