Anyway, the precise error message is "No 680x0 >= V43 available.". So, anyone running AOS 3.9 has managed to install these libs?
The mu package has a 680x0.library that acts as a generic api for the 68040.library, 68060.library, 68030.library, etc. However, I don't think the newest Setpatch accesses it. The error message is probably a generic message for the 68040.library not having a high enough version. It's kind of confusing though. The easiest thing to do would have Thomas Richter bump the version of the 68040.library. His 68040.library should have all the functionality that is necessary. I do NOT get a similar error with my 68060 CSMK3 and the 68060.library version is 40.20. I use BlizKick as well to boot my own custom ROM. However, the flash setup is much different on the Cyberstorms than Blizzards.
The newest mu 68040.library is 40.18 which was recently uploaded on Aminet.
I just thought of a possible work around. Install the Phase5 68040dummy.library (748 bytes) as 68040.library and rename the mu 68040.library to 68040new.library. Even if this works you should probably e-mail Thomas Richter and explain the problem. It's pretty easy to bump the version number and it would save headaches like this. He still has the same e-mail address as is in the docs.