I replaced all of the filter caps in the power supply yesterday and the 3000 appears to be working again, it fact, the Amber output is alot cleaner than is has even been since I got this machine.
However, I still do have a problem with my Cybergraphics 64 card occasionally producing a ghosted pink image. Wiggling the card seems to fix this. I'm thinking it's either a Buster problem (reseating Buster fixed it once) or a problem with the daughter card.