@ Wbrejnia
Now we have some scenarios:
Scenario A
1) Boot Amiga from floppy and run PCDISk
2) it initializes Bridgeboard ad activate ISA Slots
3) PC boots from PC Floppy A. or B:
Scenario B:
1) Boot Amiga from floppy and run PCDISk
2) it initializes Bridgeboard ad activate ISA Slots
3) PC boots from C: partition on Hard Disk mounted on ISA Controller
Does it or Are there any issues?
Scenario C:
1) Boot Amiga from Floppy, Initialize Bridgeboard, Initialize Amiga HD DH0:
2) Floppy movs all System to Amiga Hard Disk (running but no booting)
2) On Amiga Hard Disk or other Amiga Partition RAM:, Df0:, etc., you can put Virtual C. File and make PC boot from it.
It should be made visible to PC with an option of JDisk (if I remember well)
Scenario D
1) Boot Amiga from floppy and run PCDISk
2) it initializes Bridgeboard ad activate ISA Slots
3) PC boots from C: partition on Hard Disk mounted on ISA Controller
4) JDisks make Amiga aware it exists virtual partitions files JF0: JF1: Etcetera upto 7 on PC Hard Disk partition C:
Scenario E
1) Boot Amiga from floppy and run PCDISk
2) it initializes Bridgeboard ad activate ISA Slots
3) PC boots from C: partition on Hard Disk mounted on ISA Controller
4) JDisks make Amiga aware it exists virtual partitions files JH0: JH1: Etcetera upto 7 on PC Hard Disk partition C:
5) Amiga can transfer system from Floppy to JH0: as Dandy says, just as like any other Amiga real Hard Disk DH0: but it requires some time to boot and make all virtual partitions JF-X: visible back to Amiga side
6) Amiga will use JH0: As any normal real Hard Disk for the entire time of the session (remember it requires partitioning and formatting).
Scenario F
1) Boot from Gotek Floppy Drive Emulator
2) Gotek ADF 1 virtual Amiga Floppy boots the Amiga computer, initializes Bridgeboard with PC Disk and activate ISA Slots so then PC Hard Disk becames visible
Unfortunately Booting from Gotek does not makes the CF Card visible as an Amiga Hard Disk. It mounts upto 999 Floppy drive images ADF visible to Amiga as if were 999 separate floppies each of one visible at a single time...
So you csan only boot from ADF 1 and then mount and make visible files present on another ADF like when Amiga prompts INSERT DISK Name_XXX.
So then...
3) You can put Virtual C: partition on a file on ADF 2 or above numbering SLOT on your Gotek virtual drive, but you have to do lots of assigns and joking with inserting/removing virtual floppy ADF and made right instructions to JDisk command.
If you want to use your Amiga-PC in a different way, please explain better what you want to do.