Winhex and other hex editors will eraze the entire surface of the drive, but I'm not sure thats what you need. Sounds like you need something to set the drive up correctly rather than destroy the data on it.
Someone will have set this up before so I'm sure if theres nothing on the net someone here will be able to tell you.
When it comes to totally erazing a disk nothing does the job better than a hammer. :lol: