To get you started the following might be of interest:
movea.l 4.s,a6 ;Execbase
jsr _LVOForbid(a6) ;Disable multitasking
lea $dff000,a5 ;Custom chip base
move.w #$7FFF,intena(a5) ;Disable interrupts
move.w #$7FFF,dmacon(a5) ;Disable DMA
..... You can now do what you like

If you are running on 68010+ your VBR will be 0 at this point.
This code can be on a bootblock. But of course if you disable everything then you'll need to make your own raw trackloader. (Isn't that hard).