One suggestion is to use "Amiga Explorer". It's not free, but it's cheap and it's well worth the money for copying files from windows to the amiga. Not sure how much ram you have, but you might be able to copy the adf to ram, along with the adf to disk program and create disks that way.
AmigaExplorer can be installed via null modem cable (no disk needed) so you can buy it online and use it immediately if you have a null modem cable (radioshack still sells these).
Tom