Yes, the occilator on the card is a 50MHz one... But the question is where is the halving taking place? If it's occuring before the pCLK pin, then it's being driven with 25MHz... In which case I'll have to change out my occilator with a 100MHz one.
Either way, I'm working on an adapter board to just plug the 68060 into the 68040 socket... Adding of course the extra power and ground connectors, and high/low pulls to the other pins. Should make for an interesting project!