Remember what Sega did with the Genesis? They released a converter for Sega Master System games. That's exactly what Atari and Commodore should have done for their 16/32 bit machines. Just supply some 5.25" floppy drive that had some hardware in it for emulation. Would have been a killer product and allowed established software categories to be utilized on newer systems.
The "some hardware in it for emulation" would have had to consist of pretty much a complete C-64 and 1541.
Sega's Power Base Converter for the Genesis was just an adapter that allowed the different sized Master System cartridges to plug into a Genesis. There was no emulation involved because the Genesis contains the full hardware of the Master System.