Hi,
Another thing to check is that you have the correct 680x0.library files installed on your new boot partition. If your CSPPC is an 060 board it will crash during startup if the 68060.library and stub 68040.library (very small file) are not installed.
On the SCSI front, it's important that both ends of the SCSI bus are actively terminated as there is no termination on board the Cyberstorm. One end of the chain can be terminated by the hard drive if it has an active terminator on board.
As x56h34 mentioned, also check the settings in the Cybersotrm boot menu (hold down Esc while booting).
HTH and good luck,
Robert